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Species belonging to selected taxon:
Picea sitchensis
ABOUT THIS RECORD
ID:
MNEST001997
species:
Picea sitchensis
miRNA family:
MIRf493
source:
miRNEST
Taxonomy by NCBI:
Picea sitchensis
Picea
Pinaceae
Coniferales
Coniferopsida
Coniferophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
CGGACCAGGCTTCATTCCCCT
miRNA*
GGGACTGTTGTCTGGCTCGAG
mismatches:
5
bulges:
0
View larger
pre-miRNA
TGATCATTGGTTATTCGTTGTG
GGGACTGTTGTCTGGCTCGAG
GTCATTCAGATTCATATACTAATTGATTATCAGACTGAGTGATGC
CGGACCAGGCTT
CATTCCCCT
CAACTCCAAACCAAAAATA
dot-bracket secondary structure
......((((((....((((.(
((((.((..((((((.(((..
(((((((((.((.(((...........))).)).)))))))))..
))).))))))..
)).))))).
))))....)))))).....
SIMILARITIES
miRBase
bna-MIR166b
:
0.000000006
PMRD
bna-miR166b
:
0.000000006
microPC
miR166
:
0.00002
UniProt
no hits
RFAM
mir-166: 0.0000005
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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